Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949984.1_cds_XP_016490648.1_81056
CDS Infomation

[gene=LOC107810385] [db_xref=GeneID:107810385] [protein=AAA-ATPase At2g18193-like] [protein_id=XP_016490648.1] [location=complement(join(106506..107060,107326..108312))] [gbkey=CDS]
Sequence

ATGTACGACGTCTCAAAAATGCAGAACACGGCATCAACCTTATTCTCGGCGTACGCTTCT
CTAGCGGCGTCAATGATGCTTGTTCGCACCATGGCTAACGATCTCATCCCTAAATCCCTC
CTCACTTACATCCAATCAGCTATCAGTTATCTCTTCACTCCACTTTCTAGCCAGCTCACT
ATCATCGTTGACGAACAGTGTGGTATGACCAGAAACCAAGTGTATGAAGCCGCCGAAATT
TACCTCCGTACAAAGATCGGCCCAAACGCTGACCGAGTCCGGGCTCACAAAACTCCTAAA
CAGAAAAACATCAACGTTAGCATAGAGAAGGATGAAGAGATCAGTGATGTATACGGCGTC
GTACAGTTGAAATGGAAATTGGTTTCTGTTGAGCCCCAGGACCGAAGTTATACCCCAGAA
AAAAGATTCTTTGAGCTCAGTTTTAATAAGAAGTTTAAAGAAAGTGTGTTGAATGAGTAT
TTACCTTTTGTGTTGACCAAGGCTAAGGAGATTCAAGATAATGATAGGGCTGTGAAATTG
TACACAAGGGATTGTCCTTGTGGTAATGATGACGATGGGTATGGTTATGGGGGTGGTGGT
GGTGGGGTTTGGGGTTCTATTAATTTGGACCATCCTGCAACTTTTGATACTTTGGCTATG
GAACCTGATATGAAGAAGATGATAATTGAGGATCTTGATAGATTTGTGAAAAGGAGAGAT
TTTTATAAGAAAGTTGGTAAGGCTTGGAAAAGAGGGTATCTTTTATATGGACCTCCAGGA
ACTGGGAAATCTAGCTTGATTGCTGCCATGGCCAATTACTTGAAGTTTGATATTTATGAT
TTGGAACTTACCAGTCTGTATTCTAACTCGGAATTAAGAAGGATTTTGATATCCACCTCG
AACCGATCTATTATTGTGATTGAAGATATTGATTGTAGCGTGGAAATGCACGATCGAAAC
CTTGGGCATCAACCCGCCGACACTAAGTTAACGTTATCTGGTTTGTTGAACTTCATTGAT
GGATTGTGGTCCAATTGTGGGGACGAAAGAATTATTGTATTCACAACCAACCGTAAGGAG
AAATTAGATCCAGCACTATTGAGACCTGGTCGAATGGATATGCATATTCATATGTCCTAT
TGTACTAATCAGAGTTTCAAGATTCTGGCTTTTAACTACCTAGGCGTTCGTGACCATAGA
CTATTCGAGGAAATTGAAGGCCTAATCAAGAATGTAGAGGTAACCCCTGCAGAAATTGCA
GAGGAACTAATGAGAAGTGAGGATGCTGATGTTGCTCTTGAGGGAGTGGTTAATTTGCTC
AAGCGAAAAGCCAATGAAGCCAATCGAATCAAGGACGAGAAGAGTCCGAGCACCCCTGAA
GGCGATGAGAACGACGAGATTGAGGAAGAAAAGGTTGATGAAGGTGAAATTCAAGAAGCT
AAAAGATTGAGAACTGAAATGTTGGTACATACTTTGAGAAACCAAAGGAGAGGAAGAATG
AGAATTGGAAGACCGAACAGAGGAAGAAGAGGGCGTTGGTGA

Peptide Sequence

PEP ID

XP_016490648.1
PEP Infomation

PREDICTED: AAA-ATPase At2g18193-like [Nicotiana tabacum]
Sequence

MYDVSKMQNTASTLFSAYASLAASMMLVRTMANDLIPKSLLTYIQSAISYLFTPLSSQLT
IIVDEQCGMTRNQVYEAAEIYLRTKIGPNADRVRAHKTPKQKNINVSIEKDEEISDVYGV
VQLKWKLVSVEPQDRSYTPEKRFFELSFNKKFKESVLNEYLPFVLTKAKEIQDNDRAVKL
YTRDCPCGNDDDGYGYGGGGGGVWGSINLDHPATFDTLAMEPDMKKMIIEDLDRFVKRRD
FYKKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLELTSLYSNSELRRILISTS
NRSIIVIEDIDCSVEMHDRNLGHQPADTKLTLSGLLNFIDGLWSNCGDERIIVFTTNRKE
KLDPALLRPGRMDMHIHMSYCTNQSFKILAFNYLGVRDHRLFEEIEGLIKNVEVTPAEIA
EELMRSEDADVALEGVVNLLKRKANEANRIKDEKSPSTPEGDENDEIEEEKVDEGEIQEA
KRLRTEMLVHTLRNQRRGRMRIGRPNRGRRGRW

Transcript Sequence

Gene sequence data has not been registered.